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---
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name: literature-review-with-traceable-ai-evidence
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version: 1.0.0
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description: Enable researchers to ingest documents, asynchronously index them, and
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interact with multi-agent AI to answer questions with verifiable citations to original
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text.
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inputs:
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- Documents in PDF, Office, image, or text formats
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- Research questions or topics of interest
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- 'Optional: user model configuration via .env or settings'
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steps:
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- Upload documents to a project (via desktop app or web UI)
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- System asynchronously converts Office docs to PDF if needed, runs OCR to extract
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text with coordinates, chunks and embeds into vector store
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- User starts a main research session or creates exploration branches without waiting
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for indexing to finish
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- Leader agent receives query and delegates subtasks to researcher, reviewer, writer
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subagents
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- Subagents perform hybrid retrieval and rerank to find relevant chunks with source
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coordinates
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- Agents synthesize answers and return evidence with clickable citations that highlight
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original pages
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- User verifies conclusions by navigating to cited source locations and can save notes
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to research memory or mind map
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outputs:
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- AI-generated answers with traceable evidence (coordinates, page highlights)
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- Research session history with branches
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- Indexed document library for future queries
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- Mind maps or structured notes
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- Persistent run events for resuming sessions
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tags: []
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metadata:
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source_repo: https://github.com/0verL1nk/PaperSage.git
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extracted_at: ''
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confidence: 0.85
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---
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# literature-review-with-traceable-ai-evidence
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Enable researchers to ingest documents, asynchronously index them, and interact with multi-agent AI to answer questions with verifiable citations to original text.
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## Steps
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1. Upload documents to a project (via desktop app or web UI)
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2. System asynchronously converts Office docs to PDF if needed, runs OCR to extract text with coordinates, chunks and embeds into vector store
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3. User starts a main research session or creates exploration branches without waiting for indexing to finish
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4. Leader agent receives query and delegates subtasks to researcher, reviewer, writer subagents
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5. Subagents perform hybrid retrieval and rerank to find relevant chunks with source coordinates
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6. Agents synthesize answers and return evidence with clickable citations that highlight original pages
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7. User verifies conclusions by navigating to cited source locations and can save notes to research memory or mind map
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## Inputs
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- Documents in PDF, Office, image, or text formats
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- Research questions or topics of interest
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- Optional: user model configuration via .env or settings
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## Outputs
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- AI-generated answers with traceable evidence (coordinates, page highlights)
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- Research session history with branches
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- Indexed document library for future queries
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- Mind maps or structured notes
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- Persistent run events for resuming sessions
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## Failure Modes
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- Missing local Office/LibreOffice converter causes document conversion failure
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- First-time model download may be slow or require network
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- OCR may have low confidence on poor quality scans
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- Retrieval might miss context if chunking splits semantics
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- Multi-agent coordination could produce conflicting intermediate results
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## Source
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Extracted from: [https://github.com/0verL1nk/PaperSage.git](https://github.com/0verL1nk/PaperSage.git)
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Confidence: 0.85
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# Commands: literature-review-with-traceable-ai-evidence
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## Available Commands
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- `/skill literature-review-with-traceable-ai-evidence` — Load this skill
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- `/run literature-review-with-traceable-ai-evidence` — Execute workflow
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# Examples: literature-review-with-traceable-ai-evidence
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## Usage Example
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```python
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# How to use this skill
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# Inputs: Documents in PDF, Office, image, or text formats, Research questions or topics of interest, Optional: user model configuration via .env or settings
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# Process: Upload documents to a project (via desktop app or web UI) → System asynchronously converts Office docs to PDF if needed, runs OCR to extract text with coordinates, chunks and embeds into vector store → User starts a main research session or creates exploration branches without waiting for indexing to finish
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# Outputs: AI-generated answers with traceable evidence (coordinates, page highlights), Research session history with branches, Indexed document library for future queries, Mind maps or structured notes, Persistent run events for resuming sessions
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```
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{
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"name": "literature-review-with-traceable-ai-evidence",
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"version": "1.0.0",
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"goal": "Enable researchers to ingest documents, asynchronously index them, and interact with multi-agent AI to answer questions with verifiable citations to original text.",
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"inputs": [
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"Documents in PDF, Office, image, or text formats",
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"Research questions or topics of interest",
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"Optional: user model configuration via .env or settings"
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],
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"steps": [
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"Upload documents to a project (via desktop app or web UI)",
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"System asynchronously converts Office docs to PDF if needed, runs OCR to extract text with coordinates, chunks and embeds into vector store",
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"User starts a main research session or creates exploration branches without waiting for indexing to finish",
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"Leader agent receives query and delegates subtasks to researcher, reviewer, writer subagents",
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"Subagents perform hybrid retrieval and rerank to find relevant chunks with source coordinates",
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"Agents synthesize answers and return evidence with clickable citations that highlight original pages",
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"User verifies conclusions by navigating to cited source locations and can save notes to research memory or mind map"
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],
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"outputs": [
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"AI-generated answers with traceable evidence (coordinates, page highlights)",
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"Research session history with branches",
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"Indexed document library for future queries",
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"Mind maps or structured notes",
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"Persistent run events for resuming sessions"
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],
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"failure_modes": [
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"Missing local Office/LibreOffice converter causes document conversion failure",
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"First-time model download may be slow or require network",
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"OCR may have low confidence on poor quality scans",
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"Retrieval might miss context if chunking splits semantics",
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"Multi-agent coordination could produce conflicting intermediate results"
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],
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"confidence": 0.85,
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"explanation": "The README describes PaperSage's core workflow: asynchronous document ingestion with OCR/indexing, followed by multi-agent question answering with cited evidence. This process is not tied to the specific codebase and can be reused as a general literature review methodology for any document-centric research using RAG and agent collaboration.",
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"source_repo": "https://github.com/0verL1nk/PaperSage.git",
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"score": 1.0
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}
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---
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name: text-concatenation-pipeline
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version: 1.0.0
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description: Combine two text inputs into a single output string using a Blacknode
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node graph.
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inputs:
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- text_a (string)
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- text_b (string)
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steps:
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- Instantiate a Text node with parameter value set to text_a
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- Instantiate a Text node with parameter value set to text_b
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- Instantiate a Concat node with no parameters
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- Instantiate an Output node
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- Connect output port 'value' of first Text node to input port 'a' of Concat node
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- Connect output port 'value' of second Text node to input port 'b' of Concat node
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- Connect output port 'value' of Concat node to input port 'value' of Output node
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- Execute graph by cooking the Output node's 'value' port to obtain result
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outputs:
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- concatenated_text (string)
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tags: []
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metadata:
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source_repo: https://github.com/temiroff/Blacknode.git
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extracted_at: ''
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confidence: 0.95
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---
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# text-concatenation-pipeline
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Combine two text inputs into a single output string using a Blacknode node graph.
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## Steps
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1. Instantiate a Text node with parameter value set to text_a
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2. Instantiate a Text node with parameter value set to text_b
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3. Instantiate a Concat node with no parameters
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4. Instantiate an Output node
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5. Connect output port 'value' of first Text node to input port 'a' of Concat node
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6. Connect output port 'value' of second Text node to input port 'b' of Concat node
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7. Connect output port 'value' of Concat node to input port 'value' of Output node
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8. Execute graph by cooking the Output node's 'value' port to obtain result
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## Inputs
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- text_a (string)
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- text_b (string)
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## Outputs
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- concatenated_text (string)
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## Failure Modes
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- One or both text inputs missing or non-string
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- Invalid node connections (port mismatch)
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- Runtime error during graph execution
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## Source
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Extracted from: [https://github.com/temiroff/Blacknode.git](https://github.com/temiroff/Blacknode.git)
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Confidence: 0.95
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# Commands: text-concatenation-pipeline
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## Available Commands
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- `/skill text-concatenation-pipeline` — Load this skill
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- `/run text-concatenation-pipeline` — Execute workflow
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# Examples: text-concatenation-pipeline
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## Usage Example
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```python
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# How to use this skill
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# Inputs: text_a (string), text_b (string)
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# Process: Instantiate a Text node with parameter value set to text_a → Instantiate a Text node with parameter value set to text_b → Instantiate a Concat node with no parameters
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# Outputs: concatenated_text (string)
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```
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{
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"name": "text-concatenation-pipeline",
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"version": "1.0.0",
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"goal": "Combine two text inputs into a single output string using a Blacknode node graph.",
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"inputs": [
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"text_a (string)",
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"text_b (string)"
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],
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"steps": [
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"Instantiate a Text node with parameter value set to text_a",
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"Instantiate a Text node with parameter value set to text_b",
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"Instantiate a Concat node with no parameters",
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"Instantiate an Output node",
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"Connect output port 'value' of first Text node to input port 'a' of Concat node",
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"Connect output port 'value' of second Text node to input port 'b' of Concat node",
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"Connect output port 'value' of Concat node to input port 'value' of Output node",
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"Execute graph by cooking the Output node's 'value' port to obtain result"
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],
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"outputs": [
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"concatenated_text (string)"
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],
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"failure_modes": [
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"One or both text inputs missing or non-string",
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"Invalid node connections (port mismatch)",
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"Runtime error during graph execution"
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],
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"confidence": 0.95,
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"explanation": "Extracted from examples/converted_text_pipeline.py and referenced templates/text-pipeline.json in the Blacknode repository. The workflow is a basic reusable pattern for string concatenation using the visual node editor's graph model.",
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"source_repo": "https://github.com/temiroff/Blacknode.git",
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"score": 1.0
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}
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+1
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@@ -1,4 +1,4 @@
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# Tests: literature-review-with-traceable-ai-evidence
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# Tests: text-concatenation-pipeline
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## Test Checklist
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## Test Checklist
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Reference in New Issue
Block a user